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Research

Research

BDR researchers coming from diverse research fields are working together to achieve higher goals.

Seminars & Symposia

Seminars & Symposia

BDR hosts annual symposium and regular seminars inviting international scientists in life science.

Careers & Study

Careers & Study

BDR embraces people from diverse backgrounds, and strives to create an open and supportive setting for research.

Outreach

Outreach

BDR communicates the appeal and significance of our research to society through the use of various media and activities.

News

News

From research, events, people and everything in between, find out what’s going on at RIKEN BDR.

About Us

About Us

Exploring the scientific foundations of life through interdisciplinary approaches to address society’s problems.

Photo of principal investigator

Team Leader
Yumi Konagaya Ph.D.

Laboratory for Quantitative Biology of Cell Fate Decision

LocationKobe / Developmental Biology Buildings

E-mailyumi.konagaya[at]riken.jp

Please replace [at] with @.

Recruiting graduate students

Uncovering the molecular mechanisms underlying the cell fate decision of intestinal epithelial stem cells

Tissue homeostasis relies on constant tissue renewal, notably within the rapidly regenerating intestinal epithelium. Precise control of cell proliferation during differentiation is critical for maintaining tissue homeostasis, as its disruptions lead to atrophy or cancer. Our research focuses on elucidating how cell proliferation and differentiation are orchestrated in the intestinal epithelium. In particular, we aim to uncover the molecular mechanisms underlying the cell fate decision of intestinal epithelial stem cells by live imaging of mouse intestinal organoids, multiplexed tissue imaging, and quantitative analyses.

Small Intestinal Organoids

An intestinal organoid expressing the cell cycle reporter FUCCI

Selected Publications

He J, Yamamoto M, Sumiyama K, et al.
Two-photon AMPK and ATP imaging reveals the bias between rods and cones in glycolysis utility.
FASEB Journal 35(9), e21880 Wed Sep 01 00:00:00 JST 2021 doi: 10.1096/fj.202101121R

Konagaya Y, Takakura K, Sogabe M, et al.
Intravital imaging reveals cell cycle-dependent myogenic cell migration during muscle regeneration.
Cell Cycle 19(22), 3167-3181 Sun Nov 01 00:00:00 JST 2020 doi: 10.1080/15384101.2020.1838779

Liu C, Konagaya Y, Chung M, et al.
Altered G1 signaling order and commitment point in cells proliferating without CDK4/6 activity.
Nature Communications 11(1), 5305 Tue Oct 20 00:00:00 JST 2020 doi: 10.1038/s41467-020-18966-9

Konagaya Y, Terai K, Hirao Y, et al.
A Highly Sensitive FRET Biosensor for AMPK Exhibits Heterogeneous AMPK Responses among Cells and Organs.
Cell Reports 21(9), 2628-2638 Tue Nov 28 00:00:00 JST 2017 doi: 10.1016/j.celrep.2017.10.113

Isoe Y, Konagaya Y, Yokoi S, et al.
Ontogeny and Sexual Differences in Swimming Proximity to Conspecifics in Response to Visual Cues in Medaka Fish.
Zoological Science 33(3), 246-254 Wed Jun 01 00:00:00 JST 2016 doi: 10.2108/zs150213

Members

Lab members

Yumi Konagaya

Team Leader

Ayaka Omori

Technical Staff II

Miki Fujiwara

Assistant

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