Team Leader
Shunsuke Tagami
Ph.D.
Laboratory for Advanced Biomolecular Engineering
LocationYokohama
E-mailshunsuke.tagami[at]riken.jp
Please replace [at] with @.
Research Theme
- We are engineering peptides that control cells and enzymes for use in medical and basic science.
- We are trying to experimentally reconstruct evolutional pathway from primordial peptides to elaborate proteins.
Selected Publications
Yagi S, Tagami S.
An ancestral fold reveals the evolutionary link between RNA polymerase and ribosomal proteins
Nature Communications
(2024)
doi: 10.1038/s41467-024-50013-9
Chaban A, Minakhin L, Goldobina E, et al.
Tail-tape-fused virion and non-virion RNA polymerases of a thermophilic virus with an extremely long tail
Nature Communications
(2024)
doi: 10.1038/s41467-023-44630-z
Mohri K, Huynh Nhat KP, Zouda M, et al.
Lasso peptide microcin J25 variant containing RGD motif as a PET probe for integrin αvβ3 in tumor imaging
European Journal of Pharmaceutical Sciences
(2022)
doi: 10.1016/j.ejps.2022.106339
Alfi A, Popov A, Kumar A, et al.
Cell-Free Mutant Analysis Combined with Structure Prediction of a Lasso Peptide Biosynthetic Protease B2
ACS Synthetic Biology
(2022)
doi: 10.1021/acssynbio.2c00176
Li P, Holliger P, Tagami S.
Hydrophobic-cationic peptides modulate RNA polymerase ribozyme activity by accretion
Nature Communications
13, 3050 (2022)
doi: 10.1038/s41467-022-30590-3
Yagi S, Padhi AK, Vucinic J, et al.
Seven Amino Acid Types Suffice to Create the Core Fold of RNA Polymerase.
Journal of the American Chemical Society
(2021)
doi: 10.1021/jacs.1c05367
Sumida T, Dubiley S, Wilcox B, et al.
Structural Basis of Leader Peptide Recognition in Lasso Peptide Biosynthesis Pathway.
ACS Chemical Biology.,
14(7), 1619-1627 (2019)
doi: 10.1021/acschembio.9b00348
Tagami S, Attwater J, Holliger P.
Simple peptides derived from the ribosomal core potentiate RNA polymerase ribozyme function.
Nature Chemistry
9, 325-332 (2017)
doi: 10.1038/nchem.2739
Tagami S, Sekine S, Minakhin L, et al.
Structural basis for promoter specificity switching of RNA polymerase by a phage factor.
Genes & Development
28(5), 521-531 (2014)
doi: 10.1101/gad.233916.113
Tagami S, Sekine S, Kumarevel T, et al.
Crystal structure of bacterial RNA polymerase bound with a transcription inhibitor protein.
Nature
468(7326), 978-982 (2010)
doi: 10.1038/nature09573
Members
Team LeaderShunsuke Tagami
- shunsuke.tagami[at]riken.jp
(Please replace [at] with @) - CV [PDF size:102KB]
Senior Research ScientistAkira Wada
Research ScientistAlmasul Alfi
- almasul.alfi[at]riken.jp
- CV
Research ScientistPeiying Li
- peiying.li[at]riken.jp
- CV
Postdoctoral ResearcherSubrata Dasgupta
Visiting ScientistKazumasa Ohtake
Visiting ScientistSota Yagi
- sota.yagi[at]riken.jp
- CV
Junior Research AssociateTakuto Furuhashi
Junior Research AssociateAleksandr Popov
AssistantTami Kosuge
- tami.kosuge[at]riken.jp
(Please replace [at] with @)
News
Sep. 7, 2023 Research
How a widely used antimalarial drug affects zinc levels in a malarial parasite
Apr. 4, 2022 BDR News
Dive into BDR's intriguing research
Approaching the Origin of Life with Structural Biology
Jan. 27, 2022 Research
Plausible steps toward the evolution of a key protein fold of RNA polymerases